De novo variants in CUL3 are associated with global developmental delays with or without infantile spasms
Nakashima, Mitsuko; Kato, Mitsuhiro; Matsukura, Masaru; Kira, Ryutaro; Ngu, Lock-Hock; Lichtenbelt, Klaske D; van Gassen, Koen L I; Mitsuhashi, Satomi; Saitsu, Hirotomo; Matsumoto, Naomichi
(2020) Journal of Human Genetics, volume 65, issue 9, pp. 727 - 734
(Article)
Abstract
The ubiquitin-proteasome system is the principal system for protein degradation mediated by ubiquitination and is involved in various cellular processes. Cullin-RING ligases (CRL) are one class of E3 ubiquitin ligases that mediate polyubiquitination of specific target proteins, leading to decomposition of the substrate. Cullin 3 (CUL3) is a member of
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the Cullin family proteins, which act as scaffolds of CRL. Here we describe three cases of global developmental delays, with or without epilepsy, who had de novo CUL3 variants. One missense variant c.854T>C, p.(Val285Ala) and two frameshift variants c.137delG, p.(Arg46Leufs*32) and c.1239del, p.(Asp413Glufs*42) were identified by whole-exome sequencing. The Val285 residue located in the Cullin N-terminal domain and p.Val285Ala CUL3 mutant showed significantly weaker interactions to the BTB domain proteins than wild-type CUL3. Our findings suggest that de novo CUL3 variants may cause structural instability of the CRL complex and impairment of the ubiquitin-proteasome system, leading to diverse neuropsychiatric disorders.
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Keywords: Genetics(clinical), Genetics, Journal Article
ISSN: 1434-5161
Publisher: Springer Nature
Note: Funding Information: URLs. 3.5KJPN (https://ijgvd.megabank.tohoku.ac.jp/). gnomAD (http://exac.broadinstitute.org). SIFT (http://provean.jcvi.org/index. php). Polyphen-2 (http://genetics.bwh.harvard.edu/pph2/). CADD (http://gnomad.broadinstitute.org/). MutationTaster (http://www.muta tiontaster.org/). GERP (http://mendel.stanford.edu/SidowLab/downloa ds/GERP/index.html). PhastCons (http://compgen.cshl.edu/phast/) Acknowledgements We express our gratitude to all patients and their families for participating in this study. We would also like to thank Ms. M. Sato, N. Watanabe, M Tsujimura, K Shibasaki and A. Kita-moto for their technical assistance. This work was supported by AMED under the grant numbers JP19ek0109280, JP19dm0107090, JP19ek0109301, JP19ek0109348, JP18kk020501 (to NM); JSPS KAKENHI under the grant numbers JP16H05160 (to HS), JP16K09975 (to MK), JP17H01539 (to NM) and JP19K07977 (to SM); grants from the Ministry of Health, Labor, and Welfare (to NM and MK); and the Takeda Science Foundation (to MN, HS and NM); HUSM Grant-in-Aid from Hamamatsu University School of Medicine. Publisher Copyright: © 2020, The Author(s), under exclusive licence to The Japan Society of Human Genetics. Copyright: Copyright 2020 Elsevier B.V., All rights reserved.
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