Unraveling the regulation of sugar beet pulp utilization in the industrially relevant fungus Aspergillus niger

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Unraveling the regulation of sugar beet pulp utilization in the industrially relevant fungus Aspergillus niger
 
Garrigues, Sandra; Kun, Roland S.; Peng, Mao; Bauer, Diane; Keymanesh, Keykhosrow; Lipzen, Anna; Ng, Vivian; Grigoriev, Igor V.; de Vries, Ronald P.
(2022) iScience, volume 25, issue 4
(Article)
Abstract
Efficient utilization of agro-industrial waste, such as sugar beet pulp, is crucial for the bio-based economy. The fungus Aspergillus niger possesses a wide array of enzymes that degrade complex plant biomass substrates, and several regulators have been reported to play a role in their production. The role of the regulators ... read more
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Keywords: Microbial metabolism, Mycology, General
DOI: https://doi.org/10.1016/j.isci.2022.104065
ISSN: 2589-0042
Publisher: Elsevier
Note: Funding Information: The authors acknowledge Prof. Adrian Tsang (Concordia University, Montreal, Canada) who provided the ANEp8-Cas9-pyrG plasmid. RSK and SG were supported by a grant of the Applied Science Division (TTW) of NWO and the Biotechnology and Safety Program of the Ministry of Infrastructure and Water Management 15807 to R.P.dV. The work (proposal: 10.46936/fics.proj.2018.50379/60006403) conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231. S.G. and R.S.K. performed the experiments, analyzed the data, and wrote the original manuscript. D.B. K.K. A.L. and V.N. performed the RNA sequencing and initial analysis. I.V.G. supervised the RNA sequencing. M.P. contributed to the bioinformatics analysis. R.P.dV. designed the experiments, supervised the research, and reviewed and edited the manuscript. All authors commented on and approved the submitted manuscript. The authors declare no competing interests. Funding Information: The authors acknowledge Prof. Adrian Tsang (Concordia University, Montreal, Canada) who provided the ANEp8-Cas9-pyrG plasmid. RSK and SG were supported by a grant of the Applied Science Division (TTW) of NWO and the Biotechnology and Safety Program of the Ministry of Infrastructure and Water Management 15807 to R.P.dV. Funding Information: The work (proposal: 10.46936/fics.proj.2018.50379/60006403) conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231 . Publisher Copyright: © 2022 The Author(s)
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