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Utrecht University Repository: Recent submissions

  • Vegetation changes in the Grote Nete valley (Campine region, Belgium) during the Boreal: a response to the 9.3 ka event? 
    Verbruggen, Frederike; Hoek, Wim Z.; Verhegge, Jeroen; Bourgeois, Ignace; Boudin, Mathieu; Kubiak-Martens, Lucy M.; Ryssaert, Caroline; Crombé, Philippe (Springer, 2022-10-27)
    Environmental changes have had an enormous impact on prehistoric hunter-gatherers as they affect the biotic landscape and availability of resources such as freshwater, edible plants, game and fish. To assess whether various ...
  • Model order reduction for seismic waveform modelling: inspiration from normal modes 
    Hawkins, R.; Khalid, M. H.; Smetana, K.; Trampert, J. (Wiley-Blackwell, 2023-09)
    The computational cost of full waveform simulation in seismological contexts is known to be expensive and generally requires large clusters of computers working in parallel. Although there have been many methods proposed ...
  • The relationship between tonic immobility and the development, severity, and course of posttraumatic stress disorder: Systematic and meta-analytic literature review 
    Coimbra, B.M.; Hoeboer, C.M.; van Zuiden, M.; Williamson, Rachel E.; D'Elia, A.T.; Mello, Andrea Feijo; Mello, Marcelo Feijo; Olff, M. (Elsevier Limited, 2023-06)
    Background: Tonic immobility (TI) is a reflexive, involuntary response that causes motor inhibition, vocal suppression, and analgesia. TI is elicited by extreme fear and perception of entrapment in a life-threatening ...
  • Global and Zonal-Mean Hydrological Response to Early Eocene Warmth 
    Cramwinckel, Margot J.; Burls, Natalie J.; Fahad, Abdullah A.; Knapp, Scott; West, Christopher K.; Reichgelt, Tammo; Greenwood, David R.; Chan, Wing Le; Donnadieu, Yannick; Hutchinson, David K.; de Boer, Agatha M.; Ladant, Jean Baptiste; Morozova, Polina A.; Niezgodzki, Igor; Knorr, Gregor; Steinig, Sebastian; Zhang, Zhongshi; Zhu, Jiang; Feng, Ran; Lunt, Daniel J.; Abe-Ouchi, Ayako; Inglis, Gordon N. (Wiley Online Library, 2023-06)
    Earth's hydrological cycle is expected to intensify in response to global warming, with a “wet-gets-wetter, dry-gets-drier” response anticipated over the ocean. Subtropical regions (∼15°–30°N/S) are predicted to become ...
  • North Atlantic Drift Sediments Constrain Eocene Tidal Dissipation and the Evolution of the Earth-Moon System 
    De Vleeschouwer, David; Penman, Donald E.; D'haenens, Simon; Wu, Fei; Westerhold, Thomas; Vahlenkamp, Maximilian; Cappelli, Carlotta; Agnini, Claudia; Kordesch, Wendy E.C.; King, Daniel J.; van der Ploeg, Robin; Pälike, Heiko; Turner, Sandra Kirtland; Wilson, Paul; Norris, Richard D.; Zachos, James C.; Bohaty, Steven M.; Hull, Pincelli M. (Wiley Online Library, 2023-02)
    Cyclostratigraphy and astrochronology are now at the forefront of geologic timekeeping. While this technique heavily relies on the accuracy of astronomical calculations, solar system chaos limits how far back astronomical ...
  • Renaturing cities: from utopias to contested realities and futures 
    Sarabi, S.; Frantzeskaki, N.; Waldenberger, J.; Alvarado, O.; Raaimakers, D.; Runhaar, H.A.C.; Stijnen, C.A.E.; Toxopeus, H.S.; Vrînceanu, Ema (Urban und Fischer Verlag GmbH und Co. KG, 2023-08)
    Renaturing urban environments is a transformative pathway for urban sustainability that can be leveraged for collaborative research and planning to reverse long trends of ecosystem degradation. People-nature connections ...
  • Neurophysiological and psychosocial mechanisms of fibromyalgia: A comprehensive review and call for an integrative model 
    Pinto, A.M.; Luís, M.; Geenen, R.; Palavra, F.; Lumley, M.A.; Ablin, J.N.; Amris, K.; Branco, J.; Buskila, D.; Castelhano, J.; Castelo-Branco, M.; Crofford, L.J.; Fitzcharles, M.-A.; Häuser, W.; Kosek, E.; López-Solà, M.; Mease, P.; Marques, T.R.; Jacobs, J.W.G.; Castilho, P.; da Silva, J.A.P. (Elsevier Ltd, 2023-08)
    Research into the neurobiological and psychosocial mechanisms involved in fibromyalgia has progressed remarkably in recent years. Despite this, current accounts of fibromyalgia fail to capture the complex, dynamic, and ...
  • National EPOS initiatives and participation to the EPOS integration plan 
    Atakan, Kuvvet; Cocco, Massimo; Orlecka-Sikora, Beata; Pijnenburg, Ronald; Michalek, Jan; Rønnevik, Christian; Olszewska, Dorota; Górka-Kostrubiec, Beata; Drury, Martyn R. (Editrice Compositori s.r.l., 2022-04-29)
    European Plate Observing System (EPOS) is designed on a three-level architecture. The national research infrastructures (NRIs) constitute the backbone of the EPOS delivery framework, where data are generated, processed, ...
  • Efficient Direct and Limited Environmental Transmission of SARS-CoV-2 Lineage B.1.22 in Domestic Cats 
    Gerhards, Nora M; Gonzales, Jose L; Vreman, Sandra; Ravesloot, Lars; van den Brand, Judith M A; Doekes, Harmen P; Egberink, Herman F; Stegeman, Arjan; Oreshkova, Nadia; van der Poel, Wim H M; de Jong, Mart C M (American Society for Microbiology, 2023-05)
    The susceptibility of domestic cats to infection with SARS-CoV-2 has been demonstrated by several experimental studies and field observations. We performed an extensive study to further characterize the transmission of ...
  • Proteogenomic Features of the Highly Polymorphic Histidine-rich Glycoprotein Arose Late in Evolution 
    Zou, Yang; van Breukelen, Bas; Pronker, Matti; Reiding, Karli; Heck, Albert J R (American Society for Biochemistry and Molecular Biology Inc., 2023-07-01)
    Histidine-rich glycoprotein (HRG) is a liver-produced protein circulating in human serum at high concentrations of around 125 μg/ml. HRG belongs to the family of type-3 cystatins and has been implicated in a plethora of ...
  • Biomechanical evaluation of a novel biomimetic artificial intervertebral disc in canine cervical cadaveric spines 
    Jacobs, Celien A. M.; Doodkorte, Remco J. P.; Kamali, S. Amir; Abdelgawad, Abdelrahman M.; Ghazanfari, Samaneh; Jockenhoevel, Stefan; Arts, J. J. Chris; Tryfonidou, Marianna A.; Meij, Björn P.; Ito, Keita (Wiley-Blackwell Publishing Ltd, 2023-06)
    Background Context Cervical disc replacement (CDR) aims to restore motion of the treated level to reduce the risk of adjacent segment disease (ASD) compared with spinal fusion. However, first-generation articulating devices ...
  • Measuring the Quality of Domain Models Extracted from Textbooks with Learning Curves Analysis 
    Alpizar-Chacon, Isaac; Sosnovsky, Sergey; Brusilovsky, Peter (Springer, 2023-06-26)
    This paper evaluates an automatically extracted domain model from textbooks and applies learning curve analysis to assess its ability to represent students’ knowledge and learning. Results show that extracted concepts are ...
  • Development of a quantitative North and Central European job exposure matrix for wood dust 
    Basinas, Ioannis; Liukkonen, Tuula; Sigsgaard, Torben; Andersen, Nils T; Vestergaard, Jesper M; Galea, Karen S; van Tongeren, Martie; Wiggans, Ruth; Savary, Barbara; Eduard, Wijnand; Kolstad, Henrik A; Vested, Anne; Kromhout, Hans; Schlünssen, Vivi (Oxford University Press, 2023-07-01)
    Wood dust is an established carcinogen also linked to several non malignant respiratory disorders. A major limitation in research on wood dust and its health effects is the lack of (historical) quantitative estimates of ...
  • Nuclear genome organization in fungi: From gene folding to Rabl chromosomes 
    Torres, David E; Reckard, Andrew T; Klocko, Andrew D; Seidl, Michael F (Wiley-Blackwell, 2023-05)
    Comparative genomics has recently provided unprecedented insights into the biology and evolution of the fungal lineage. In the post-genomics era, a major research interest focuses now on detailing the functions of fungal ...
  • COLD REGULATED GENE 27 and 28 Antagonize the Transcriptional Activity of the RVE8/LNK1/LNK2 Circadian Complex 
    Sorkin, Maria L; Tzeng, Shin-Cheng; King, Stefanie; Romanowski, Andrés; Kahle, Nikolai; Bindbeutel, Rebecca; Hiltbrunner, Andreas; Yanovsky, Marcelo J; Evans, Bradley S; Nusinow, Dmitri A (American Society of Plant Biologists, 2023-07-03)
    Many molecular and physiological processes in plants occur at a specific time of day. These daily rhythms are coordinated in part by the circadian clock, a timekeeper that uses daylength and temperature to maintain rhythms ...
  • Prediction of outcome after ligation or thin film banding of extrahepatic shunts, based on plasma albumin concentration and hematologic expression of 8 target genes in 85 dogs 
    van Blokland-Post, Krista; Weber, Maarten F; van Wolferen, Monique E; Penning, Louis C; van Sluijs, Freek J; Kummeling, Anne (Wiley-Blackwell, 2023-03)
    BACKGROUND: In dogs with a congenital extrahepatic portosystemic shunt (EHPSS), outcome after surgical attenuation is difficult to predict. OBJECTIVES: Develop a minimally invasive test to predict outcome after surgical ...
  • In vivo and ex vivo inflammatory responses of the esophageal mucosa to food challenge in adults with eosinophilic esophagitis 
    Haasnoot, Maria L; Kleuskens, Mirelle T A; Lopez-Rincon, Alejandro; Diks, Mara A P; Terreehorst, Ingrid; Akkerdaas, Jaap H; van Ree, Ronald; van Ampting, Marleen T J; Garssen, Johan; Redegeld, Frank A; van Esch, Betty C A M; Bredenoord, Albert J (Blackwell Publishing Ltd, 2023-07)
  • Crosstalk between androgen receptor and WNT/β-catenin signaling causes sex-specific adrenocortical hyperplasia in mice 
    Lyraki, Rodanthi; Grabek, Anaëlle; Tison, Amélie; Weerasinghe-Arachchige, Lahiru-Chamara; Peitzsch, Mirko; Bechman, Nicole; Youssef, Sameh A; de Bruin, Alain; Bakker, Elvira R M; Claessens, Frank; Chaboissier, Marie-Christine; Schedl, Andreas (Company of Biologists Ltd, 2023-06-01)
    Female bias is highly prevalent in conditions such as adrenal cortex hyperplasia and neoplasia, but the reasons behind this phenomenon are poorly understood. In this study, we show that overexpression of the secreted WNT ...
  • Exposure to soluble platinum salts in precious metal refinery workers over a 17-year period 
    Smit, Lidwien A M; Jacobs, José; da Silva, Juliete; Heederik, Dick; van Rooy, Frits G; Portengen, Lützen; Houba, Remko (Oxford University Press, 2023-07-01)
    BACKGROUND: Occupational exposure to soluble chlorinated platinum (Pt) salts, commonly called chloroplatinates, is a known cause of Pt salt sensitisation (PSS) and occupational asthma. We aimed to model inhalable soluble ...
  • Metal Exposure and Risk of Parkinson Disease: a systematic review and meta-analysis 
    Zhao, Yujia; Ray, Anushree; Portengen, Lützen; Vermeulen, Roel; Peters, Susan (Oxford University Press, 2023-07-01)
    Metal exposure has been suggested as a possible environmental risk factor for Parkinson disease (PD). We searched the PubMed, EMBASE, and Cochrane databases to systematically review the literature on the relationship between ...